Biopolym. Cell. 1997; 13(2):150-156.
Клітинна біологія
Порівняльний аналіз нуклеотидих послідовностей 5.SS ядерної рибосомної ДНК 30 видів рослин
1Комарницький С. І.
  1. Інститут клітинної біології та генетичної інженерії НАН України
    вул. Академіка Заболотного, 148, Київ, Україна, 03680

Abstract

Здійснено порівняльний аналіз первинної структури 5.8 S рДНК 30 видів рослин, у тому числі моху, папороті, двох голонасінних і 26 покритонасінних видів. 56,8 % потенційно філогенетично інформативних позицій локалізуються у трьох дискретних ділянках молекули. На основі цих даних окреслено основні родинні зв'язки у рослин.

References

[1] Doyle JA, Donoghue MJ. The importance of fossils in elucidating seed plant phylogeny and macroevolution. Review of Palaeobotany and Palynology. 1987;50(1-2):63-95.
[2] Krassilov VA. The origin and early stages of the evolution of flowering plants. M.: Nauka, 1989. 127 p.
[3] Meien SV. Fundamentals of paleobotany. M.: Nedra, 1987. 403 p.
[4] Takhtajan AL. Flowering plants: origin and dispersal. Washington D. C: Smithsonian Inst., 1969; 320 p.
[5] Archie JW. Phylogenies of plant families: a demonstration of phylogenetic randomness in DNA sequence data derived from proteins. Evolution. 1989;43(8):1796-800.
[6] Antonov AS, Troitsky AV. The results of the study of the evolution of plant rRNA cast doubt on the universality hypothesis of "molecular clock." Zh Evolut Biokhim i Fiziol. 1986; 22(4):343-9.
[7] Martin PG, Boulter D, Penny D. Angiosperm Phylogeny Studied Using Sequences of Five Macromolecules. Taxon. 1985;34(3):393-400.
[8] Hsiao C, Chatterton NJ, Asay KH, Jensen KB. Phylogenetic relationships of 10 grass species: an assessment of phylogenetic utility of the internal transcribed spacer region in nuclear ribosomal DNA in monocots. Genome. 1994;37(1):112-20.
[9] Hsiao C, Chatterton NJ, Asay KH, Jensen KB. Molecular phylogeny of the Pooideae (Poaceae) based on nuclear rDNA (ITS) sequences. Theor Appl Genet. 1995;90(3-4):389-98.
[10] Hsiao C, Chatterton NJ, Asay KH, Jensen KB. Phylogenetic relationships of the monogenomic species of the wheat tribe, Triticeae (Poaceae), inferred from nuclear rDNA (internal transcribed spacer) sequences. Genome. 1995;38(2):211-23.
[11] Baldwin BG. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositae. Mol Phylogenet Evol. 1992;1(1):3-16.
[12] Suh Y, Thien LB, Reeve HE, Zimmer EA. Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of ribosomal DNA in winteraceae. Am J Bot. 1993;80(9):1042-55.
[13] Wojciechowski MF, Sanderson MJ, Baldwin BG, Donoghue MJ. Monophyly of aneuploid astragalus (Fabaceae): evidence from nuclear ribosomal DNA internal transcribed spacer sequences. Am J Bot. 1993;80(6):711-22.
[14] Sun Y, Skinner DZ, Liang GH, Hulbert SH. Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA. Theor Appl Genet. 1994;89(1):26-32.
[15] Troitsky AV, Melekhovets YuF, Rakhimova GM, Bobrova VK, Valiejo-Roman KM, Antonov AS. Angiosperm origin and early stages of seed plant evolution deduced from rRNA sequence comparisons. J Mol Evol. 1991;32(3):253-61.
[16] Melekhovets YuF, Troitsky AV. Comparative analysis of primary and secondary structures of 5.8S rRNA of higher plants. Dokl Akad Nauk BelSSR. 1990. 34(4):372.
[17] Erdmann VA, Wolters J. Collection of published 5S, 5.8S and 4.5S ribosomal RNA sequences. Nucleic Acids Res. 1986;14 Suppl:r1-59.
[18] D'Ovidio R. Nucleotide sequence of a 5.8S rDNA gene and of the internal transcribed spacers from Populus deltoides. Plant Mol Biol. 1992;19(6):1069-72.
[19] Kavanagh TA, Timmis JN. Structure of melon rDNA and nucleotide sequence of the 17-25S spacer region. Theor Appl Genet. 1988;76(5):673-80.
[20] Chemeris AV, Vakhitov VA. [Primary structure of the 5.8S gene of rRNA and internal transcribed spacers of rDNA in diploid wheat Triticum urartu thum. ex. gandil]. Mol Biol (Mosk). 1989;23(1):320-6.
[21] Venkateswarlu K, Nazar R. A conserved core structure in the 18-25S rRNA intergenic region from tobacco, Nicotiana rustica. Plant Mol Biol. 1991;17(2):189-94.
[22] Schiebel K, Hemleben V. Nucleotide sequence of the 18S-25S spacer region from rDNA of mung bean. Nucleic Acids Res. 1989;17(7):2852.
[23] Takaiwa F, Oono K, Sugiura M. Nucleotide sequence of the 17S-25S spacer region from rice rDNA. Plant Mol Biol. 1985;4(6):355-64.
[24] Komarnytskii SI, Komarnytskii IK, Kox A, Parokonnyi A. Variability of 5.8S DNA in some species of Solanaseaea family. Tsitol. Genet. 1997; 31(5):16-22.
[25] Troitsky AV, Bobrova VK, Melekhovets YuF, Valiejo-Roman KM. The nucleotide sequence of 5.8S rRNA from the moss Mnium rugicum Laur. Nucleic Acids Res. 1989;17(1):459.
[26] Unfried I, Gruendler P. Nucleotide sequence of the 5.8S and 25S rRNA genes and of the internal transcribed spacers from Arabidopsis thaliana. Nucleic Acids Res. 1990;18(13):4011.
[27] Rathgeber J, Capesius I. Nucleotide sequence of the 18S-25S spacer region from mustard DNA. Nucleic Acids Res. 1989;17(18):7522.
[28] Higgins DG, Bleasby AJ, Fuchs R. CLUSTAL V: improved software for multiple sequence alignment. Comput Appl Biosci. 1992;8(2):189-91.
[29] Felsenstein J. PHYLIP-Phylogeny Inference Package, Ver­sion 3.5. 1992.
[30] Rakhimova GM, Troitskiĭ AV, Klikunova IN, Antonov AS. [Phylogenetic analysis of partial nucleotide sequences of 18S rRNA for 14 plant species]. Mol Biol (Mosk). 1989;23(3):830-42.
[31] Enomoto S, Ogihara Y, Tsunewaki K. Studies on the origin of crop species by restriction endonuclease analysis of organellar DNA. I. Phylogenetic relationships among ten cereals revealed by the restriction fragment patterns of chloroplast DNA. Jpn J Genet. 1985;60(5):411–24.
[32] Macfarlane TD. Poaceea subfamily Pooideae. Grass sistematics and evolution. Washington D. C: Smithsonian Inst., 1987: 265-76.