Biopolym. Cell. 2005; 21(1):48-54.
Cell Biology
Intra- and intermolecular interactions mediated by
adaptor protein Ruk/CIN85/SETA
- Institute of Cell Biology, NAS of Ukraine
14/16, Drahomanov Str., Lviv, Ukraine, 79005 - University College London
Gower Str., London WC1E 6BT, UK - Cardiff School of Biosciences
The Sir Martin Evans Building, Museum Avenue, Cardiff, CF10 3AX
Abstract
Ruk/CIN85l SETA is a member of a separate and evolutionary conserved family of adapter I scaffold
proteins implicated in apoptic and receptor tyrosine kinases signalling, rearrangement of actin cytoskeleton
and cell adhesion, podocyte and T cell functions. Self-regulation through intra- and intercellular
interactions can be supposed for RuklCIN85l SETA as this protein contains SH3 domains and proline-rich
sequence, localized within one polypeptide chain, as well as C-terminal coiled-coil region. The ability of
Ruk proline-rich motifs to interact with its own SH3 domains in an intramolecular fashion and coiled-coil
region to mediate oligomerization between different isoforms was assessed in GST pull down experiments.
It was shown that both Ruk SH3A and to a less extent SH3B domains can interact with its own proline-rich
sequences in a cooperative manner, while coiled-coil region provide for isoforms oligomerization. SH3C
domain appear exerts conformational constraints, imposed on coiled-coil region, restricting the level of
oligomerization. We also demonstrated that the ability of exogenous ligands to interact with Ruk polyprotine
motifs is changing during the course of TNFa-induced apoptosis of human myelomonocytic W37 cells.
Keywords: adaptor protein, SII3 domain, proline-rich region, coiled-coil region, protein-protein
interaction
Full text: (PDF, in English)
References
[1]
Pawson T, Nash P. Assembly of cell regulatory systems through protein interaction domains. Science. 2003;300(5618):445-52.
[2]
Zarrinpar A, Bhattacharyya RP, Lim WA. The structure and function of proline recognition domains. Sci STKE. 2003;2003(179):RE8.
[3]
Gout I, Middleton G, Adu J, Ninkina NN, Drobot LB, Filonenko V, Matsuka G, Davies AM, Waterfield M, Buchman VL. Negative regulation of PI 3-kinase by Ruk, a novel adaptor protein. EMBO J. 2000;19(15):4015-25.
[4]
Take H, Watanabe S, Takeda K, Yu ZX, Iwata N, Kajigaya S. Cloning and characterization of a novel adaptor protein, CIN85, that interacts with c-Cbl. Biochem Biophys Res Commun. 2000;268(2):321-8.
[5]
Borinstein SC, Hyatt MA, Sykes VW, Straub RE, Lipkowitz S, Boulter J, Bogler O. SETA is a multifunctional adapter protein with three SH3 domains that binds Grb2, Cbl, and the novel SB1 proteins. Cell Signal. 2000;12(11-12):769-79.
[7]
Buchman VL, Luke C, Borthwick EB, Gout I, Ninkina N. Organization of the mouse Ruk locus and expression of isoforms in mouse tissues. Gene. 2002;295(1):13-17.
[8]
Chen B, Borinstein SC, Gillis J, Sykes VW, Bogler O. The glioma-associated protein SETA interacts with AIP1/Alix and ALG-2 and modulates apoptosis in astrocytes. J Biol Chem. 2000;275(25):19275-81.
[9]
Soubeyran P, Kowanetz K, Szymkiewicz I, Langdon WY, Dikic I. Cbl-CIN85-endophilin complex mediates ligand-induced downregulation of EGF receptors. Nature. 2002;416(6877):183-7.
[10]
Szymkiewicz I, Kowanetz K, Soubeyran P, Dinarina A, Lipkowitz S, Dikic I. CIN85 participates in Cbl-b-mediated down-regulation of receptor tyrosine kinases. J Biol Chem. 2002;277(42):39666-72.
[11]
Petrelli A, Gilestro GF, Lanzardo S, Comoglio PM, Migone N, Giordano S. The endophilin-CIN85-Cbl complex mediates ligand-dependent downregulation of c-Met. Nature. 2002;416(6877):187-90.
[12]
Hutchings NJ, Clarkson N, Chalkley R, Barclay AN, Brown MH. Linking the T cell surface protein CD2 to the actin-capping protein CAPZ via CMS and CIN85. J Biol Chem. 2003;278(25):22396-403.
[13]
Schmidt MH, Chen B, Randazzo LM, Bogler O. SETA/CIN85/Ruk and its binding partner AIP1 associate with diverse cytoskeletal elements, including FAKs, and modulate cell adhesion. J Cell Sci. 2003;116(Pt 14):2845-55.
[14]
Tibaldi EV, Reinherz EL. CD2BP3, CIN85 and the structurally related adaptor protein CMS bind to the same CD2 cytoplasmic segment, but elicit divergent functional activities. Int Immunol. 2003;15(3):313-29.
[15]
Drel VR, Danyluk OYu, Shuvajeva GYu, Ihumenceva NI, Kit YuYa, Gout IT, Buchman VL, Drobot LB. Subcellular localization of adapter protein Ruk, in HEK293 cells. Biopolym Cell. 2002; 18(4):312-8.
[16]
Kit YY, Drel VR, Petriv OI, Kovalyova VA, Shuvaeva GY, Palivoda OY, Vovk EI, Bobak YP, Rzeszowska-Wolny J, Gout IT, Buchman VL, Drobot LB. Adaptor protein Ruk1 forms protein-protein complexes with endonuclease activity in HEK293 cells. Biochemistry (Mosc). 2003;68(7):810-5.
[17]
Borthwick EB, Korobko IV, Luke C, Drel VR, Fedyshyn YY, Ninkina N, Drobot LB, Buchman VL. Multiple domains of Ruk/CIN85/SETA/CD2BP3 are involved in interaction with p85alpha regulatory subunit of PI 3-kinase. J Mol Biol. 2004;343(4):1135-46.
[18]
Webster GA, Perkins ND. Transcriptional cross talk between NF-kappaB and p53. Mol Cell Biol. 1999;19(5):3485-95.
[19]
Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970;227(5259):680-5.
[20]
Towbin H, Staehelin T, Gordon J. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. 1979. Biotechnology. 1992;24:145-9.
[21]
Kowanetz K, Szymkiewicz I, Haglund K, Kowanetz M, Husnjak K, Taylor JD, Soubeyran P, Engstrom U, Ladbury JE, Dikic I. Identification of a novel proline-arginine motif involved in CIN85-dependent clustering of Cbl and down-regulation of epidermal growth factor receptors. J Biol Chem. 2003;278(41):39735-46.
[22]
Verdier F, Valovka T, Zhyvoloup A, Drobot LB, Buchman V, Waterfield M, Gout I. Ruk is ubiquitinated but not degraded by the proteasome. Eur J Biochem. 2002;269(14):3402-8.
[23]
Watanabe S, Take H, Takeda K, Yu ZX, Iwata N, Kajigaya S. Characterization of the CIN85 adaptor protein and identification of components involved in CIN85 complexes. Biochem Biophys Res Commun. 2000;278(1):167-74.
[24]
Xu W, Doshi A, Lei M, Eck MJ, Harrison SC. Crystal structures of c-Src reveal features of its autoinhibitory mechanism. Mol Cell. 1999;3(5):629-38.
[25]
Williams JC, Weijland A, Gonfloni S, Thompson A, Courtneidge SA, Superti-Furga G, Wierenga RK. The 2.35 A crystal structure of the inactivated form of chicken Src: a dynamic molecule with multiple regulatory interactions. J Mol Biol. 1997;274(5):757-75.
[26]
Sicheri F, Moarefi I, Kuriyan J. Crystal structure of the Src family tyrosine kinase Hck. Nature. 1997;385(6617):602-9.
[27]
Nagar B, Hantschel O, Young MA, Scheffzek K, Veach D, Bornmann W, Clarkson B, Superti-Furga G, Kuriyan J. Structural basis for the autoinhibition of c-Abl tyrosine kinase. Cell. 2003;112(6):859-71.
[28]
Zhang H, Gallo KA. Autoinhibition of mixed lineage kinase 3 through its Src homology 3 domain. J Biol Chem. 2001;276(49):45598-603.
[29]
Yuzawa S, Suzuki NN, Fujioka Y, Ogura K, Sumimoto H, Inagaki F. A molecular mechanism for autoinhibition of the tandem SH3 domains of p47phox, the regulatory subunit of the phagocyte NADPH oxidase. Genes Cells. 2004;9(5):443-56.
[30]
Moarefi I, LaFevre-Bernt M, Sicheri F, Huse M, Lee CH, Kuriyan J, Miller WT. Activation of the Src-family tyrosine kinase Hck by SH3 domain displacement. Nature. 1997;385(6617):650-3.
[31]
Briggs SD, Sharkey M, Stevenson M, Smithgall TE. SH3-mediated Hck tyrosine kinase activation and fibroblast transformation by the Nef protein of HIV-1. J Biol Chem. 1997;272(29):17899-902.
[32]
Hansson H, Smith CI, H?rd T. Both proline-rich sequences in the TH region of Bruton's tyrosine kinase stabilize intermolecular interactions with the SH3 domain. FEBS Lett. 2001;508(1):11-5.