Biopolym. Cell. 2001; 17(5):380-387.
Structure and Function of Biopolymers
Restriction enzyme mapping of the ribosomal RNA genes of the genus Nicotiana
- Institute of Cell Biology and Genetic Engineering, NAS of Ukraine
148, Akademika Zabolotnogo Str., Kyiv, Ukraine, 03680
Abstract
The organization of the nuclear-encoded ribosomal RNA genes of 66 species of the genus Nicotiana was analysed by restriction enzyme mapping. We have not found any differences in the position of restriction enzyme sites within the sequences coding for 18S, 5.8S, and 26S rRNAs. The Investigation of the number and relative position of cleavage sites for restriction endonucleases (EcoRI, BamHJ, Xbal, EcoRV, HindiII, Oral) in the IGS regions of Nicotiana in general confirmed the modern division of Nicotiana species into sections.
Full text: (PDF, in Ukrainian)
References
[1]
Goodspeed TH. The genus Niconiana. Massachusetts: Waltham, 1954. 536 p.
[2]
Burbidge NT. The australian species of Nicotiana L. (Solanaceae). Aust. J. Bot. 1960; 8(3): 342-95.
[3]
Merxmuller H, Buttler KP. Nicotiana in der Afrikanischen Namibein Pflanzengeographisches and Phylogenetisches Ratsel. Mitt Bot Munchen. 1975; 12: 91-104.
[4]
Narajan RKL. Nuclear DNA changes, genome differentiation and evolution in Nicotiana. Plant Syst Evol. 1987; 157(3-4):161-80.
[5]
Koukalov? B, Komarnitsky IK, Kuhrov? V. The distribution of tobacco HRS60 DNA repeated sequences in species of the genus Nicotiana. Plant Sci. 1993;88(1):39–44.
[6]
Chen K, Johal S, Wildman SG. Role of chloroplast and nuclear DNA genes during evolution of fraction I protein. Eds T. Bucher, W. Neupert, W. Sebald, S. Werner. Genetic and Biogenesis of chloroplast and mitochondria. Amsterdam; New York; Oxford: Elsevier, 1976: 3-11.
[8]
Hemleben V, Ganal M, Gerstner J, Sehiebel K, Torres RA. Organization and length heterogeneity of plant ribosomal RNA genes. The architecture of Eukaryotic Genes. Ed. G. Kahl. Weinheim: VHC, 1988: 371-84.
[9]
Delseny M, Cooke R, Penon P. Sequence heterogeneity in radish nuclear ribosomal RNA genes. Plant Sci Lett. 1983;30(1):107–19.
[10]
Yakura K, Kato A, Tanfuji S. Structural organization of ribosomal DNA in four Trillium species and Paris vertieillata. Plant Cell Physiol. 1983; 24(7): 1231-40.
[11]
Borisyuk NV, Kostyshin SS, Volkov RA, Miroshnichenko TP. Ribosomal RNA gene organization in higher plants from Nicotiana genus. Mol Biol (Mosk). 1989; 23(4):1067-74.
[12]
Volkov RA, Borisyuk NV, Kostyshin SS, Panchukh II. Variability rRNA gene rearrangements in the chromosome apparatus in tobacco. Mol Biol (Mosk). 1991; 25:442-50.
[13]
Komarnitskii IK, Komarnitskii SI. Size polymorphism of restricted fragments of rDNA intergenic spacer in some tobacco species. Tsitol Genet. 1996; 30(1):65-72.
[14]
Komarnitskii IK, Komarnitskii SI. Variability of ribosomal DNA intergenic spacer in American tobacco lines. Tsitol Genet. 1997; 31(2):29-36.
[15]
Borisjuk NV, Davidjuk YM, Kostishin SS, Miroshnichenco GP, Velasco R, Hemleben V, Volkov RA. Structural analysis of rDNA in the genus Nicotiana. Plant Mol Biol. 1997;35(5):655-60.
[16]
Murray MG, Thompson WF. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 1980;8(19):4321-5.
[17]
Reed KC, Mann DA. Rapid transfer of DNA from agarose gels to nylon membranes. Nucleic Acids Res. 1985;13(20):7207-21.
[19]
Feinberg AP, Vogelstein B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem. 1983;132(1):6-13.
[20]
Kolosha VO, Fodor II. Structure heterogeneity of Citrus limon rDNA. Mol Biol (Mosk). 1986; 20(3): 656-62.
[21]
Gerlach WL, Bedbrook JR. Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Res. 1979;7(7):1869-85.
[22]
Borisjuk N, Borisjuk L, Petjuch G, Hemleben V. Comparison of nuclear ribosomal RNA genes among Solanum species and other Solanaceae. Genome. 1994;37(2):271-9.
[23]
Komarnyts'ky? SI, Komarnyts'ky? IK, Cox A, Parokonny? AS. [The evolution of the sequences of the internal spacer of nuclear ribosomal DNA for American species in the genus Nicotiana]. Tsitol Genet. 1998;32(3):69-76.
[24]
Gray JC. Serological reaction of fraction I proteins from interspecific hybrids in the genus Nicotiana. Plant Syst Evolut. 1978; 129(3):177-83.
[25]
Kova?ik A, Fajkus J, Koukalov? B, Bezd?k M. Species-specific evolution of telomeric and rDNA repeats in the tobacco composite genome. Theor Appl Genet. 1996;92(8):1108-11.
[26]
Gray JC, Kung SD, Wildman SG. Origin of Nicotiana tabacum L. detected by polypeptide composition of Fraction I protein. Nature. 1974;252(5480):226-7.
[27]
Kenton A, Parokonny AS, Gleba YY, Bennett MD. Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics. Mol Gen Genet. 1993;240(2):159-69.
[28]
Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW. Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci U S A. 1984;81(24):8014-8.
[29]
Appels R, Dvo??k J. The wheat ribosomal DNA spacer region: Its structure and variation in populations and among species. Theor Appl Genet. 1982;63(4):337-48.
[30]
Santoni S, Bervill? A. Characterization of the nuclear ribosomal DNA units and phylogeny of Beta L. wild forms and cultivated beets. Theor Appl Genet. 1992;83(5):533-42.
[31]
Hilu KW, Johnson JL. Ribosomal DNA variation in finger millet and wild species of Eleusine (Poaceae). Theor Appl Genet. 1992;83(6-7):895-902.